Protein-ligand Complex:
Protein (PDB ID: 3b5r - Variant: LA707R)
& Ligand (ChEMBL ID: CHEMBL121830)

GUID

https://w3id.org/psnpbind/variant/428/ligand/CHEMBL121830

PDB ID

3b5r

Variant Type

LA707R

Ligand ID (ChEMBL ID)

CHEMBL121830

Ligand Similarity* to the one in the experimentally obtained structure of the 3b5r complex


* Tanimoto similarity obtained from the comparison of the FP2 fingerprint of the ligands, calculated using OpenBabel
0.608333

Binding Affinity

  • Conformer 1: -5.4 Kcal/Mol
    Conformer 2: -5.1 Kcal/Mol
    Conformer 3: -4.9 Kcal/Mol

Binding Affiniy against the Wild-type protein

WT Conformer 1: -7.8 Kcal/Mol