Protein-ligand Complex:
Protein (PDB ID: 2c3i - Variant: YB53H)
& Ligand (ChEMBL ID: CHEMBL3952816)

GUID

https://w3id.org/psnpbind/variant/505/ligand/CHEMBL3952816

PDB ID

2c3i

Variant Type

YB53H

Ligand ID (ChEMBL ID)

CHEMBL3952816

Ligand Similarity* to the one in the experimentally obtained structure of the 2c3i complex


* Tanimoto similarity obtained from the comparison of the FP2 fingerprint of the ligands, calculated using OpenBabel
0.705

Binding Affinity

  • Conformer 1: -9.6 Kcal/Mol
    Conformer 2: -9.4 Kcal/Mol
    Conformer 3: -9.4 Kcal/Mol

Binding Affiniy against the Wild-type protein

WT Conformer 1: -10.0 Kcal/Mol