Protein-ligand Complex:
Protein (PDB ID: 3udh - Variant: WT)
& Ligand (ChEMBL ID: CHEMBL418980)

GUID

https://w3id.org/psnpbind/variant/730/ligand/CHEMBL418980

PDB ID

3udh

Variant Type

WT

Ligand ID (ChEMBL ID)

CHEMBL418980

Ligand Similarity* to the one in the experimentally obtained structure of the 3udh complex


* Tanimoto similarity obtained from the comparison of the FP2 fingerprint of the ligands, calculated using OpenBabel
0.681416

Binding Affinity

  • Conformer 1: -8.6 Kcal/Mol
    Conformer 2: -8.5 Kcal/Mol
    Conformer 3: -8.5 Kcal/Mol

Binding Affinities Against Other 3udh Variants

DA32G Conformer 1: -8.4 Kcal/Mol
TA33I Conformer 1: -8.7 Kcal/Mol
GA230S Conformer 1: -9.0 Kcal/Mol
GA230D Conformer 1: -7.6 Kcal/Mol